HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6rw4

System information

Experimental technique Electron Microscopy
Experimental resolution 2.97
System mass 1179.57 kDa
Deposition year 2019
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 6rw4
Reference Khawaja Anas, Itoh Yuzuru, Remes Cristina, Spåhr Henrik, Yukhnovets Olessya, Höfig Henning, Amunts Alexey, Rorbach Joanna. . Distinct pre-initiation steps in human mitochondrial translation Nature Communications

Compound NAD
Residue . / 1701
Chain GA / A
Non-redundant False
Interacting RNA chains A/A
Volume 695.60 Å3
Hydrophobicity 0.285
Hydrophilicity 1.151
Buriedness 0.830
Don/acc character 0.976
SiteScore 0.779
D Score 1.024

Compound SPM
Residue . / 1702
Chain HA / A
Non-redundant False
Interacting RNA chains A/A
Volume 830.06 Å3
Hydrophobicity 0.186
Hydrophilicity 1.208
Buriedness 0.808
Don/acc character 3.282
SiteScore 1.224
D Score 1.031

Compound SRY
Residue . / 1703
Chain IA / A
Non-redundant True
Interacting RNA chains A/A
Volume 249.70 Å3
Hydrophobicity 0.368
Hydrophilicity 1.041
Buriedness 0.695
Don/acc character 2.551
SiteScore 1.058
D Score 0.902