Complex 6c65
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.80 |
| System mass | 36.97 kDa |
| Deposition year | 2018 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 6c65 |
| Reference | Trachman Robert J., Abdolahzadeh Amir, Andreoni Alessio, Cojocaru Razvan, Knutson Jay R., Ryckelynck Michael, Unrau Peter J., Ferré-D’Amaré Adrian R.. . Crystal Structures of the Mango-II RNA Aptamer Reveal Heterogeneous Fluorophore Binding and Guide Engineering of Variants with Improved Selectivity and Brightness Biochemistry |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | D / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| Volume | 436.30 Å3 |
| Hydrophobicity | 0.855 |
| Hydrophilicity | 0.739 |
| Buriedness | 0.636 |
| Don/acc character | 0.724 |
| SiteScore | 1.017 |
| D Score | 1.081 |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | H / B |
| Non-redundant | False |
| Interacting RNA chains | B/B |
| Volume | 384.16 Å3 |
| Hydrophobicity | 0.782 |
| Hydrophilicity | 0.739 |
| Buriedness | 0.629 |
| Don/acc character | 0.728 |
| SiteScore | 1.012 |
| D Score | 1.077 |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | L / C |
| Non-redundant | False |
| Interacting RNA chains | C/C |
| Volume | 341.97 Å3 |
| Hydrophobicity | 0.829 |
| Hydrophilicity | 0.736 |
| Buriedness | 0.630 |
| Don/acc character | 0.692 |
| SiteScore | 1.013 |
| D Score | 1.078 |