Complex 6c65
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.80 |
| System mass | 36.97 kDa |
| Deposition year | 2018 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 6c65 |
| Reference | Trachman Robert J., Abdolahzadeh Amir, Andreoni Alessio, Cojocaru Razvan, Knutson Jay R., Ryckelynck Michael, Unrau Peter J., Ferré-D’Amaré Adrian R.. . Crystal Structures of the Mango-II RNA Aptamer Reveal Heterogeneous Fluorophore Binding and Guide Engineering of Variants with Improved Selectivity and Brightness Biochemistry |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | D / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| Volume | 423.95 Å3 |
| Hydrophobicity | 0.506 |
| Hydrophilicity | 0.790 |
| Buriedness | 0.623 |
| Don/acc character | 5.151 |
| SiteScore | 0.998 |
| D Score | 1.056 |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | H / B |
| Non-redundant | False |
| Interacting RNA chains | B/B |
| Volume | 395.82 Å3 |
| Hydrophobicity | 0.504 |
| Hydrophilicity | 0.814 |
| Buriedness | 0.622 |
| Don/acc character | 4.112 |
| SiteScore | 0.993 |
| D Score | 1.048 |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | L / C |
| Non-redundant | False |
| Interacting RNA chains | C/C |
| Volume | 352.60 Å3 |
| Hydrophobicity | 0.526 |
| Hydrophilicity | 0.865 |
| Buriedness | 0.625 |
| Don/acc character | 4.454 |
| SiteScore | 0.985 |
| D Score | 1.033 |