Complex 6c63
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.90 |
| System mass | 36.04 kDa |
| Deposition year | 2018 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 6c63 |
| Reference | Trachman Robert J., Abdolahzadeh Amir, Andreoni Alessio, Cojocaru Razvan, Knutson Jay R., Ryckelynck Michael, Unrau Peter J., Ferré-D’Amaré Adrian R.. . Crystal Structures of the Mango-II RNA Aptamer Reveal Heterogeneous Fluorophore Binding and Guide Engineering of Variants with Improved Selectivity and Brightness Biochemistry |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | D / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 400.28 Å3 |
| Hydrophobicity | 0.684 |
| Hydrophilicity | 0.723 |
| Buriedness | 0.636 |
| Don/acc character | 4.763 |
| SiteScore | 1.020 |
| D Score | 1.086 |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | H / B |
| Non-redundant | False |
| Interacting RNA chains | B/B |
| Volume | 394.45 Å3 |
| Hydrophobicity | 0.556 |
| Hydrophilicity | 0.832 |
| Buriedness | 0.615 |
| Don/acc character | 4.719 |
| SiteScore | 0.985 |
| D Score | 1.038 |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | K / C |
| Non-redundant | False |
| Interacting RNA chains | C/C |
| Volume | 346.43 Å3 |
| Hydrophobicity | 0.436 |
| Hydrophilicity | 0.971 |
| Buriedness | 0.620 |
| Don/acc character | 2.241 |
| SiteScore | 0.961 |
| D Score | 0.995 |