Complex 6c63
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.90 |
| System mass | 36.04 kDa |
| Deposition year | 2018 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 6c63 |
| Reference | Trachman Robert J., Abdolahzadeh Amir, Andreoni Alessio, Cojocaru Razvan, Knutson Jay R., Ryckelynck Michael, Unrau Peter J., Ferré-D’Amaré Adrian R.. . Crystal Structures of the Mango-II RNA Aptamer Reveal Heterogeneous Fluorophore Binding and Guide Engineering of Variants with Improved Selectivity and Brightness Biochemistry |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | D / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| Volume | 391.02 Å3 |
| Hydrophobicity | 0.847 |
| Hydrophilicity | 0.683 |
| Buriedness | 0.637 |
| Don/acc character | 0.746 |
| SiteScore | 1.028 |
| D Score | 1.100 |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | H / B |
| Non-redundant | False |
| Interacting RNA chains | B/B |
| Volume | 379.36 Å3 |
| Hydrophobicity | 0.823 |
| Hydrophilicity | 0.771 |
| Buriedness | 0.620 |
| Don/acc character | 0.889 |
| SiteScore | 1.000 |
| D Score | 1.061 |
| Compound | EKJ |
| Residue | . / 101 |
| Chain | K / C |
| Non-redundant | False |
| Interacting RNA chains | C/C |
| Volume | 337.85 Å3 |
| Hydrophobicity | 0.701 |
| Hydrophilicity | 0.892 |
| Buriedness | 0.635 |
| Don/acc character | 0.741 |
| SiteScore | 0.987 |
| D Score | 1.030 |