HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 6ar1

System information

Experimental technique X-ray
Experimental resolution 3.01
System mass 116.36 kDa
Deposition year 2017
Molecule type RNA/DNA/Protein
# RNA entities 1
Organism N/A
RCSB PDB Entry 6ar1
Reference Stamos Jennifer L., Lentzsch Alfred M., Lambowitz Alan M.. . Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications Molecular Cell
Equivalence Class NR_all_10432.2
BGSU version: 4.48

Compound DTP
Residue . / 501
Chain G / A
Non-redundant True
Interacting RNA chains C/C
RNA environment detailled DNA, protein, ion
RNA environment global RNA/DNA/Protein
RNA family chains C/C: ribozyme
RNA family global ribozyme
Volume 606.08 Å3
Hydrophobicity 0.277
Hydrophilicity 1.649
Buriedness 0.843
Don/acc character 0.583
SiteScore 1.097
D Score 0.908
Kd

Compound DTP
Residue . / 501
Chain J / D
Non-redundant True
Interacting RNA chains F/F
RNA environment detailled DNA, protein, ion
RNA environment global RNA/DNA/Protein
RNA family chains F/F: ribozyme
RNA family global ribozyme
Volume 513.47 Å3
Hydrophobicity 0.298
Hydrophilicity 1.562
Buriedness 0.826
Don/acc character 0.624
SiteScore 1.085
D Score 0.926
Kd