HARIBOSS

Harnessing RIBOnucleic acid – Small molecules Structures


Complex 5zei

System information

Experimental technique X-ray
Experimental resolution 2.10
System mass 14.81
Deposition year 2018
Molecule type RNA
# RNA entities 1
Organism []
RCSB PDB Entry 5zei
Reference Kanazawa Hiroki, Baba Fumika, Koganei Mai, Kondo Jiro. . A structural basis for the antibiotic resistance conferred by an N1-methylation of A1408 in 16S rRNA Nucleic Acids Research

Pocket GET_.:C/101:A

Compound GET
Non-redundant True
Interacting RNA chains B/B, A/A
Volume 37.04
Hydrophobicity 0.499
Hydrophilicity 0.686
Buriedness 0.559
Don/acc character 1.175
SiteScore 0.637
D Score 0.618

Pocket GET_.:D/101:B

Compound GET
Non-redundant True
Interacting RNA chains B/B, A/A
Volume 75.46
Hydrophobicity 0.453
Hydrophilicity 0.739
Buriedness 0.577
Don/acc character 0.897
SiteScore 0.665
D Score 0.646