HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5wwr

System information

Experimental technique X-ray
Experimental resolution 3.10
System mass 154.92 kDa
Deposition year 2017
Molecule type RNA/Protein
# RNA entities 1
Organism Homo
RCSB PDB Entry 5wwr
Reference Liu Ru-Juan, Long Tao, Li Jing, Li Hao, Wang En-Duo. . Structural basis for substrate binding and catalytic mechanism of a human RNA:m5C methyltransferase NSun6 Nucleic Acids Research
Equivalence Class NR_all_99471.3
BGSU version: 4.48

Compound SFG
Residue . / 501
Chain E / A
Non-redundant True
Interacting RNA chains C/C
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains C/C: tRNA
RNA family global tRNA
Volume 314.19 Å3
Hydrophobicity 1.212
Hydrophilicity 1.173
Buriedness 0.935
Don/acc character 0.858
SiteScore 1.158
D Score 1.119
Kd

Compound SFG
Residue . / 501
Chain F / B
Non-redundant False
Interacting RNA chains D/D
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains D/D: tRNA
RNA family global tRNA
Volume 336.48 Å3
Hydrophobicity 0.851
Hydrophilicity 1.193
Buriedness 0.920
Don/acc character 0.849
SiteScore 1.148
D Score 1.103
Kd