HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5v3f

System information

Experimental technique X-ray
Experimental resolution 1.70
System mass 22.43 kDa
Deposition year 2017
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 5v3f
Reference Trachman Robert J, Demeshkina Natalia A, Lau Matthew W L, Panchapakesan Shanker Shyam S, Jeng Sunny C Y, Unrau Peter J, Ferré-D'Amaré Adrian R. . Structural basis for high-affinity fluorophore binding and activation by RNA Mango Nature Chemical Biology

Compound 74G
Residue . / 104
Chain F / A
Non-redundant True
Interacting RNA chains A/A
Volume 256.91 Å3
Hydrophobicity 0.881
Hydrophilicity 0.745
Buriedness 0.614
Don/acc character 6.098
SiteScore 1.001
D Score 1.065

Compound 74G
Residue . / 104
Chain J / B
Non-redundant False
Interacting RNA chains B/B
Volume 251.08 Å3
Hydrophobicity 0.721
Hydrophilicity 0.745
Buriedness 0.588
Don/acc character 4.203
SiteScore 0.984
D Score 1.050