Complex 5dgv
System information
| Experimental technique | X-ray |
| Experimental resolution | 3.10 |
| System mass | 6271.24 kDa |
| Deposition year | 2015 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Saccharomyces |
| RCSB PDB Entry | 5dgv |
| Equivalence Class |
NR_all_90506.85
BGSU version: 4.49 |
| Compound | SPS |
| Residue | . / 3401 |
| Chain | YF / C |
| Non-redundant | True |
| Interacting RNA chains | JA/1, GF/C |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | GF/C: tRNA, JA/1: rRNA |
| RNA family global | multiple |
| Volume | 714.81 Å3 |
| Hydrophobicity | 0.332 |
| Hydrophilicity | 1.181 |
| Buriedness | 0.743 |
| Don/acc character | 1.030 |
| SiteScore | 1.180 |
| D Score | 1.001 |
| Kd | — |
| Compound | SPS |
| Residue | . / 3401 |
| Chain | AG / D |
| Non-redundant | True |
| Interacting RNA chains | HF/D, KD/5 |
| RNA environment detailled | protein, ion |
| RNA environment global | RNA/Protein |
| RNA family chains | HF/D: tRNA, KD/5: rRNA |
| RNA family global | multiple |
| Volume | 419.83 Å3 |
| Hydrophobicity | 0.443 |
| Hydrophilicity | 1.235 |
| Buriedness | 0.739 |
| Don/acc character | 0.896 |
| SiteScore | 1.177 |
| D Score | 0.981 |
| Kd | — |