HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5aa0

System information

Experimental technique Electron Microscopy
Experimental resolution 5.00
System mass 2311.02 kDa
Deposition year 2015
Molecule type RNA/Protein
# RNA entities 4
Organism Thermus
RCSB PDB Entry 5aa0
Reference Kumar Veerendra, Chen Yun, Ero Rya, Ahmed Tofayel, Tan Jackie, Li Zhe, Wong Andrew See Weng, Bhushan Shashi, Gao Yong-Gui. . Structure of BipA in GTP form bound to the ratcheted ribosome Proceedings of the National Academy of Sciences

Compound 8AN
Residue . / 3002
Chain HB / AA
Non-redundant True
Interacting RNA chains A/AA, DB/BD
Volume 774.15 Å3
Hydrophobicity 0.140
Hydrophilicity 1.452
Buriedness 0.740
Don/acc character 2.064
SiteScore 1.028
D Score 0.911

Compound NMY
Residue . / 3001
Chain GB / AA
Non-redundant False
Interacting RNA chains A/AA
Volume 44.59 Å3
Hydrophobicity 0.435
Hydrophilicity 0.676
Buriedness 0.594
Don/acc character 1.736
SiteScore 0.532
D Score 0.475

Compound NMY
Residue . / 1601
Chain JB / BA
Non-redundant False
Interacting RNA chains HA/BA
Volume 282.97 Å3
Hydrophobicity 0.282
Hydrophilicity 0.922
Buriedness 0.671
Don/acc character 3.755
SiteScore 0.967
D Score 0.994