HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 5aa0

System information

Experimental technique Electron Microscopy
Experimental resolution 5.00
System mass 2311.02 kDa
Deposition year 2015
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 5aa0
Reference Kumar Veerendra, Chen Yun, Ero Rya, Ahmed Tofayel, Tan Jackie, Li Zhe, Wong Andrew See Weng, Bhushan Shashi, Gao Yong-Gui. . Structure of BipA in GTP form bound to the ratcheted ribosome Proceedings of the National Academy of Sciences

Compound 8AN
Residue . / 3002
Chain HB / AA
Non-redundant True
Interacting RNA chains A/AA, DB/BD
Volume 781.35 Å3
Hydrophobicity 0.149
Hydrophilicity 1.358
Buriedness 0.743
Don/acc character 2.136
SiteScore 1.180
D Score 0.943

Compound NMY
Residue . / 3001
Chain GB / AA
Non-redundant True
Interacting RNA chains A/AA
Volume 45.62 Å3
Hydrophobicity 0.347
Hydrophilicity 0.734
Buriedness 0.595
Don/acc character 1.784
SiteScore 0.661
D Score 0.443

Compound NMY
Residue . / 1601
Chain JB / BA
Non-redundant True
Interacting RNA chains HA/BA
Volume 278.52 Å3
Hydrophobicity 0.255
Hydrophilicity 0.905
Buriedness 0.677
Don/acc character 3.636
SiteScore 1.097
D Score 0.968