HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4ycp

System information

Experimental technique X-ray
Experimental resolution 2.55
System mass 60.92 kDa
Deposition year 2015
Molecule type RNA/Protein
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 4ycp
Reference Byrne Robert T., Jenkins Huw T., Peters Daniel T., Whelan Fiona, Stowell James, Aziz Naveed, Kasatsky Pavel, Rodnina Marina V., Koonin Eugene V., Konevega Andrey L., Antson Alfred A.. . Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases Proceedings of the National Academy of Sciences
Equivalence Class NR_all_51962.8
BGSU version: 4.48

Compound FMN
Residue . / 401
Chain C / A
Non-redundant True
Interacting RNA chains B/B
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains B/B: unknown
RNA family global unknown
Volume 355.01 Å3
Hydrophobicity 0.330
Hydrophilicity 1.734
Buriedness 0.918
Don/acc character 0.565
SiteScore 1.147
D Score 0.925
Kd