HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4n48

System information

Experimental technique X-ray
Experimental resolution 2.70
System mass 102.23 kDa
Deposition year 2013
Molecule type RNA/Protein
# RNA entities 1
Organism N/A
RCSB PDB Entry 4n48
Reference Smietanski Miroslaw, Werner Maria, Purta Elzbieta, Kaminska Katarzyna H., Stepinski Janusz, Darzynkiewicz Edward, Nowotny Marcin, Bujnicki Janusz M.. . Structural analysis of human 2′-O-ribose methyltransferases involved in mRNA cap structure formation Nature Communications

Compound SAM
Residue . / 601
Chain E / A
Non-redundant True
Interacting RNA chains C/D
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains C/D: mRNA
RNA family global mRNA
Volume 321.05 Å3
Hydrophobicity 0.665
Hydrophilicity 1.212
Buriedness 0.811
Don/acc character 0.542
SiteScore 1.075
D Score 1.031
Kd

Compound SAM
Residue . / 601
Chain F / B
Non-redundant False
Interacting RNA chains D/G
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains D/G: mRNA
RNA family global mRNA
Volume 282.98 Å3
Hydrophobicity 0.923
Hydrophilicity 1.128
Buriedness 0.805
Don/acc character 0.420
SiteScore 1.072
D Score 1.055
Kd