HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 4ji3

System information

Experimental technique X-ray
Experimental resolution 3.35
System mass 790.67 kDa
Deposition year 2013
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 4ji3
Reference Demirci Hasan, Wang Leyi, Murphy Frank V., Murphy Eileen L., Carr Jennifer F., Blanchard Scott C., Jogl Gerwald, Dahlberg Albert E., Gregory Steven T.. . The central role of protein S12 in organizing the structure of the decoding site of the ribosome RNA
Equivalence Class NR_all_65795.87
BGSU version: 4.49

Compound SRY
Residue . / 1601
Chain V / A
Non-redundant False
Interacting RNA chains A/A
RNA environment detailled protein, ion
RNA environment global RNA/Protein
RNA family chains A/A: rRNA
RNA family global rRNA
Volume 220.55 Å3
Hydrophobicity 0.184
Hydrophilicity 1.251
Buriedness 0.654
Don/acc character 0.971
SiteScore 0.885
D Score 0.815
Kd