Complex 3c7r
System information
| Experimental technique | X-ray |
| Experimental resolution | 1.70 |
| System mass | 16.23 kDa |
| Deposition year | 2008 |
| Molecule type | RNA/DNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 3c7r |
| Reference | Freisz Séverine, Lang Kathrin, Micura Ronald, Dumas Philippe, Ennifar Eric. . Binding of Aminoglycoside Antibiotics to the Duplex Form of the HIV‐1 Genomic RNA Dimerization Initiation Site Angewandte Chemie International Edition |
| Equivalence Class |
NR_all_30081.2
BGSU version: 4.49 |
| Compound | NMY |
| Residue | . / 24 |
| Chain | C / A |
| Non-redundant | True |
| Interacting RNA chains | A/A, B/B |
| RNA environment detailled | ion, other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: TAR_rna, B/B: TAR_rna |
| RNA family global | TAR_rna |
| Volume | 511.76 Å3 |
| Hydrophobicity | 0.074 |
| Hydrophilicity | 1.222 |
| Buriedness | 0.701 |
| Don/acc character | 1.551 |
| SiteScore | 1.152 |
| D Score | 0.962 |
| Kd | — |
| Compound | NMY |
| Residue | . / 24 |
| Chain | E / B |
| Non-redundant | False |
| Interacting RNA chains | A/A, B/B |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: TAR_rna, B/B: TAR_rna |
| RNA family global | TAR_rna |
| Volume | 453.45 Å3 |
| Hydrophobicity | 0.092 |
| Hydrophilicity | 1.184 |
| Buriedness | 0.701 |
| Don/acc character | 1.408 |
| SiteScore | 1.152 |
| D Score | 0.975 |
| Kd | — |