HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 3c7r

System information

Experimental technique X-ray
Experimental resolution 1.70
System mass 16.23 kDa
Deposition year 2008
Molecule type RNA/DNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 3c7r
Reference Freisz Séverine, Lang Kathrin, Micura Ronald, Dumas Philippe, Ennifar Eric. . Binding of Aminoglycoside Antibiotics to the Duplex Form of the HIV‐1 Genomic RNA Dimerization Initiation Site Angewandte Chemie International Edition

Compound NMY
Residue . / 24
Chain C / A
Non-redundant True
Interacting RNA chains A/A, B/B
Volume 511.76 Å3
Hydrophobicity 0.074
Hydrophilicity 1.222
Buriedness 0.701
Don/acc character 1.551
SiteScore 1.152
D Score 0.962

Compound NMY
Residue . / 24
Chain E / B
Non-redundant False
Interacting RNA chains A/A, B/B
Volume 453.45 Å3
Hydrophobicity 0.092
Hydrophilicity 1.184
Buriedness 0.701
Don/acc character 1.408
SiteScore 1.152
D Score 0.975