Complex 3akz
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.90 |
| System mass | 327.21 kDa |
| Deposition year | 2010 |
| Molecule type | RNA/Protein |
| # RNA entities | 1 |
| Organism | Thermotoga |
| RCSB PDB Entry | 3akz |
| Reference | Ito Takuhiro, Yokoyama Shigeyuki. . Two enzymes bound to one transfer RNA assume alternative conformations for consecutive reactions Nature |
| Equivalence Class |
NR_all_04935.5
BGSU version: 4.48 |
| Compound | GSU |
| Residue | . / 1001 |
| Chain | I / B |
| Non-redundant | True |
| Interacting RNA chains | E/F |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | E/F: tRNA |
| RNA family global | tRNA |
| Volume | 553.26 Å3 |
| Hydrophobicity | 0.720 |
| Hydrophilicity | 1.213 |
| Buriedness | 0.837 |
| Don/acc character | 0.614 |
| SiteScore | 1.093 |
| D Score | 1.047 |
| Kd | — |
| Compound | GSU |
| Residue | . / 1001 |
| Chain | J / D |
| Non-redundant | True |
| Interacting RNA chains | F/H |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | F/H: tRNA |
| RNA family global | tRNA |
| Volume | 576.58 Å3 |
| Hydrophobicity | 0.441 |
| Hydrophilicity | 1.089 |
| Buriedness | 0.853 |
| Don/acc character | 0.799 |
| SiteScore | 1.104 |
| D Score | 1.097 |
| Kd | — |
| Compound | GSU |
| Residue | . / 1001 |
| Chain | L / A |
| Non-redundant | True |
| Interacting RNA chains | H/E |
| RNA environment detailled | protein |
| RNA environment global | RNA/Protein |
| RNA family chains | H/E: tRNA |
| RNA family global | tRNA |
| Volume | 595.45 Å3 |
| Hydrophobicity | 0.199 |
| Hydrophilicity | 1.219 |
| Buriedness | 0.809 |
| Don/acc character | 0.725 |
| SiteScore | 1.074 |
| D Score | 1.028 |
| Kd | — |