HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2ppb

System information

Experimental technique X-ray
Experimental resolution 3.00
System mass 791.75 kDa
Deposition year 2007
Molecule type RNA/DNA/Protein
# RNA entities 1
Organism N/A
RCSB PDB Entry 2ppb
Reference Vassylyev Dmitry G., Vassylyeva Marina N., Zhang Jinwei, Palangat Murali, Artsimovitch Irina, Landick Robert. . Structural basis for substrate loading in bacterial RNA polymerase Nature

Compound APC
Residue . / 5999
Chain V / D
Non-redundant True
Interacting RNA chains B/H
Volume 334.08 Å3
Hydrophobicity 0.495
Hydrophilicity 1.038
Buriedness 0.803
Don/acc character 1.152
SiteScore 0.712
D Score 0.623

Compound APC
Residue . / 6999
Chain W / M
Non-redundant True
Interacting RNA chains E/Y
Volume 196.20 Å3
Hydrophobicity 0.176
Hydrophilicity 1.388
Buriedness 0.834
Don/acc character 0.618
SiteScore 0.785
D Score 0.596