HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2ho6

System information

Experimental technique X-ray
Experimental resolution 2.80
System mass 49.67 kDa
Deposition year 2006
Molecule type RNA
# RNA entities 1
Organism Caldanaerobacter
RCSB PDB Entry 2ho6
Reference Klein Daniel J., Ferré-D'Amaré Adrian R.. . Structural Basis of glmS Ribozyme Activation by Glucosamine-6-Phosphate Science
Equivalence Class NR_all_83979.2
BGSU version: 4.48

Compound MES
Residue . / 401
Chain C / A
Non-redundant False
Interacting RNA chains B/B, A/A
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains A/A: ribozyme, B/B: ribozyme
RNA family global ribozyme
Volume 592.36 Å3
Hydrophobicity 0.136
Hydrophilicity 1.421
Buriedness 0.765
Don/acc character 1.218
SiteScore 1.195
D Score 0.936
Kd

Compound MES
Residue . / 402
Chain G / B
Non-redundant False
Interacting RNA chains B/B, A/A
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains A/A: ribozyme, B/B: ribozyme
RNA family global ribozyme
Volume 174.24 Å3
Hydrophobicity 0.018
Hydrophilicity 1.457
Buriedness 0.669
Don/acc character 0.837
SiteScore 1.089
D Score 0.813
Kd