HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2fcx

System information

Experimental technique X-ray
Experimental resolution 2.00
System mass 15.73 kDa
Deposition year 2005
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 2fcx
Reference Ennifar E.. . Targeting the dimerization initiation site of HIV-1 RNA with aminoglycosides: from crystal to cell Nucleic Acids Research

Compound XXX
Residue . / 101
Chain F / A
Non-redundant True
Interacting RNA chains B/B, A/A
RNA environment detailled ion, other
RNA environment global RNA/Other
RNA family chains A/A: TAR_rna, B/B: TAR_rna
RNA family global TAR_rna
Volume 545.71 Å3
Hydrophobicity 0.254
Hydrophilicity 1.108
Buriedness 0.683
Don/acc character 1.424
SiteScore 1.140
D Score 0.989
Kd

Compound XXX
Residue . / 201
Chain H / B
Non-redundant False
Interacting RNA chains B/B, A/A
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains A/A: TAR_rna, B/B: TAR_rna
RNA family global TAR_rna
Volume 486.37 Å3
Hydrophobicity 0.129
Hydrophilicity 1.150
Buriedness 0.681
Don/acc character 1.408
SiteScore 1.138
D Score 0.974
Kd