Complex 2et5
System information
| Experimental technique | X-ray |
| Experimental resolution | 2.20 |
| System mass | 16.01 kDa |
| Deposition year | 2005 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 2et5 |
| Reference | Francois B.. . Crystal structures of complexes between aminoglycosides and decoding A site oligonucleotides: role of the number of rings and positive charges in the specific binding leading to miscoding Nucleic Acids Research |
| Compound | RIO |
| Residue | . / 54 |
| Chain | C / A |
| Non-redundant | True |
| Interacting RNA chains | A/A, B/B |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: rRNA, B/B: rRNA |
| RNA family global | rRNA |
| Volume | 264.80 Å3 |
| Hydrophobicity | 0.034 |
| Hydrophilicity | 0.954 |
| Buriedness | 0.618 |
| Don/acc character | 2.732 |
| SiteScore | 0.976 |
| D Score | 0.823 |
| Kd | — |
| Compound | RIO |
| Residue | . / 51 |
| Chain | E / B |
| Non-redundant | True |
| Interacting RNA chains | A/A, B/B |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: rRNA, B/B: rRNA |
| RNA family global | rRNA |
| Volume | 255.19 Å3 |
| Hydrophobicity | 0.092 |
| Hydrophilicity | 0.859 |
| Buriedness | 0.615 |
| Don/acc character | 2.392 |
| SiteScore | 0.964 |
| D Score | 0.817 |
| Kd | — |
| Compound | RIO |
| Residue | . / 52 |
| Chain | F / B |
| Non-redundant | False |
| Interacting RNA chains | A/A, B/B |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: rRNA, B/B: rRNA |
| RNA family global | rRNA |
| Volume | 476.77 Å3 |
| Hydrophobicity | 0.012 |
| Hydrophilicity | 1.323 |
| Buriedness | 0.708 |
| Don/acc character | 0.941 |
| SiteScore | 1.054 |
| D Score | 0.802 |
| Kd | — |
| Compound | RIO |
| Residue | . / 53 |
| Chain | G / B |
| Non-redundant | False |
| Interacting RNA chains | A/A, B/B |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: rRNA, B/B: rRNA |
| RNA family global | rRNA |
| Volume | 509.36 Å3 |
| Hydrophobicity | 0.006 |
| Hydrophilicity | 1.334 |
| Buriedness | 0.712 |
| Don/acc character | 1.197 |
| SiteScore | 1.148 |
| D Score | 0.918 |
| Kd | — |