HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 2cv2

System information

Experimental technique X-ray
Experimental resolution 2.69
System mass 157.26 kDa
Deposition year 2005
Molecule type RNA/Protein
# RNA entities 1
Organism Thermus
RCSB PDB Entry 2cv2
Reference Sekine Shun-ichi, Shichiri Mika, Bernier Stéphane, Chênevert Robert, Lapointe Jacques, Yokoyama Shigeyuki. . Structural Bases of Transfer RNA-Dependent Amino Acid Recognition and Activation by Glutamyl-tRNA Synthetase Structure
Equivalence Class NR_all_29085.3
BGSU version: 4.48

Compound GSU
Residue . / 601
Chain H / A
Non-redundant True
Interacting RNA chains A/C
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains A/C: tRNA
RNA family global tRNA
Volume 563.89 Å3
Hydrophobicity 0.841
Hydrophilicity 1.093
Buriedness 0.855
Don/acc character 0.531
SiteScore 1.105
D Score 1.097
Kd

Compound GSU
Residue . / 602
Chain J / B
Non-redundant True
Interacting RNA chains B/D
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains B/D: tRNA
RNA family global tRNA
Volume 600.59 Å3
Hydrophobicity 0.836
Hydrophilicity 1.100
Buriedness 0.807
Don/acc character 0.627
SiteScore 1.073
D Score 1.066
Kd