HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 1uui

System information

Experimental technique Solution NMR
Experimental resolution N/A
System mass 9.63 kDa
Deposition year 2003
Molecule type RNA
# RNA entities 1
Organism Lentivirus
RCSB PDB Entry 1uui
Reference Davis Ben, Afshar Mohammad, Varani Gabriele, Murchie Alastair I.H., Karn Jonathan, Lentzen Georg, Drysdale Martin, Bower Justin, Potter Andrew J., Starkey Ian D., Swarbrick Terry, Aboul-ela Fareed. . Rational Design of Inhibitors of HIV-1 TAR RNA through the Stabilisation of Electrostatic “Hot Spots” Journal of Molecular Biology
Molecular Dynamics Simulation mmb-A01WP, mmb-A01WX, mmb-A01XG, mmb-A0228, mmb-A022I
Equivalence Class NR_all_42491.1
BGSU version: 4.48

Compound P12
Residue . / 1046
Chain B / B
Non-redundant True
Interacting RNA chains A/B
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/B: TAR_rna
RNA family global TAR_rna
Volume 94.33 Å3
Hydrophobicity 0.055
Hydrophilicity 0.569
Buriedness 0.425
Don/acc character 3.302
SiteScore 1.058
D Score 1.009
Kd