HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 1sm1

System information

Experimental technique X-ray
Experimental resolution 3.42
System mass 1390.06 kDa
Deposition year 2004
Molecule type RNA/Protein
# RNA entities 1
Organism Deinococcus
RCSB PDB Entry 1sm1
Reference Harms Jörg M, Schlünzen Frank, Fucini Paola, Bartels Heike, Yonath Ada. . Alterations at the peptidyl transferase centre of the ribosome induced by the synergistic action of the streptogramins dalfopristin and quinupristin BMC Biology
Equivalence Class NR_all_88987.11
BGSU version: 4.48

Compound DOL
Residue . / 2882
Chain GA / 0
Non-redundant True
Interacting RNA chains A/0
RNA environment detailled protein
RNA environment global RNA/Protein
RNA family chains A/0: rRNA
RNA family global rRNA
Volume 681.54 Å3
Hydrophobicity 0.425
Hydrophilicity 1.155
Buriedness 0.833
Don/acc character 1.619
SiteScore 0.792
D Score 1.063
Kd