HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 1s0v

System information

Experimental technique X-ray
Experimental resolution 3.20
System mass 447.71 kDa
Deposition year 2004
Molecule type RNA/DNA/Protein
# RNA entities 1
Organism N/A
RCSB PDB Entry 1s0v
Reference Temiakov Dmitry, Patlan Vsevolod, Anikin Michael, McAllister William T, Yokoyama Shigeyuki, Vassylyev Dmitry G. . Structural Basis for Substrate Selection by T7 RNA Polymerase Cell

Compound APC
Residue . / 2000
Chain S / A
Non-redundant True
Interacting RNA chains B/F
RNA environment detailled DNA, protein, ion
RNA environment global RNA/DNA/Protein
RNA family chains B/F: unknown
RNA family global unknown
Volume 420.52 Å3
Hydrophobicity 0.449
Hydrophilicity 1.184
Buriedness 0.816
Don/acc character 0.689
SiteScore 1.079
D Score 1.044
Kd —

Compound APC
Residue . / 2001
Chain V / B
Non-redundant True
Interacting RNA chains E/I
RNA environment detailled DNA, protein, ion
RNA environment global RNA/DNA/Protein
RNA family chains E/I: unknown
RNA family global unknown
Volume 415.03 Å3
Hydrophobicity 0.648
Hydrophilicity 1.072
Buriedness 0.824
Don/acc character 0.719
SiteScore 1.084
D Score 1.085
Kd —

Compound APC
Residue . / 2002
Chain Y / C
Non-redundant True
Interacting RNA chains H/L
RNA environment detailled DNA, protein, ion
RNA environment global RNA/DNA/Protein
RNA family chains H/L: unknown
RNA family global unknown
Volume 547.77 Å3
Hydrophobicity 0.190
Hydrophilicity 1.311
Buriedness 0.793
Don/acc character 0.866
SiteScore 1.064
D Score 0.989
Kd —

Compound APC
Residue . / 2003
Chain BA / D
Non-redundant True
Interacting RNA chains K/O
RNA environment detailled DNA, protein, ion
RNA environment global RNA/DNA/Protein
RNA family chains K/O: unknown
RNA family global unknown
Volume 449.33 Å3
Hydrophobicity 0.513
Hydrophilicity 1.217
Buriedness 0.808
Don/acc character 0.970
SiteScore 1.074
D Score 1.028
Kd —