Complex 1pbr
System information
| Experimental technique | Solution NMR |
| Experimental resolution | N/A |
| System mass | 9.31 kDa |
| Deposition year | 1996 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 1pbr |
| Reference | Fourmy Dominique, Recht Michael I., Blanchard Scott C., Puglisi Joseph D.. . Structure of the A Site of Escherichia coli 16 S Ribosomal RNA Complexed with an Aminoglycoside Antibiotic Science |
| Equivalence Class |
NR_all_85239.2
BGSU version: 4.48 |
| Compound | CYY |
| Residue | . / 102 |
| Chain | D / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 124.85 Å3 |
| Hydrophobicity | 0.137 |
| Hydrophilicity | 0.830 |
| Buriedness | 0.631 |
| Don/acc character | 3.089 |
| SiteScore | 0.772 |
| D Score | 0.569 |
| Kd | — |
| Compound | IDG |
| Residue | . / 2 |
| Chain | B / B |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 311.44 Å3 |
| Hydrophobicity | 0.000 |
| Hydrophilicity | 1.391 |
| Buriedness | 0.698 |
| Don/acc character | 2.230 |
| SiteScore | 1.150 |
| D Score | 0.905 |
| Kd | — |
| Compound | PA1 |
| Residue | . / 101 |
| Chain | C / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: rRNA |
| RNA family global | rRNA |
| Volume | 75.46 Å3 |
| Hydrophobicity | 1.016 |
| Hydrophilicity | 0.859 |
| Buriedness | 0.686 |
| Don/acc character | 2.058 |
| SiteScore | 0.913 |
| D Score | 0.733 |
| Kd | — |