HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 1o9m

System information

Experimental technique X-ray
Experimental resolution 2.40
System mass 14.67 kDa
Deposition year 2002
Molecule type RNA
# RNA entities 1
Organism Escherichia
RCSB PDB Entry 1o9m
Reference Russell Rupert J. M., Murray James B., Lentzen Georg, Haddad Jalal, Mobashery Shahriar. . The Complex of a Designer Antibiotic with a Model Aminoacyl Site of the 30S Ribosomal Subunit Revealed by X-ray Crystallography Journal of the American Chemical Society
Equivalence Class NR_all_52295.3
BGSU version: 4.48

Compound BDG
Residue . / 2499
Chain C / B
Non-redundant True
Interacting RNA chains B/B, A/A
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains A/A: rRNA, B/B: rRNA
RNA family global rRNA
Volume 120.74 Å3
Hydrophobicity 0.239
Hydrophilicity 0.733
Buriedness 0.557
Don/acc character 1.870
SiteScore 0.822
D Score 0.659
Kd