HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 1nta

System information

Experimental technique X-ray
Experimental resolution 2.90
System mass 13.79 kDa
Deposition year 2003
Molecule type RNA
# RNA entities 1
Organism N/A
RCSB PDB Entry 1nta
Reference Tereshko Valentina, Skripkin Eugene, Patel Dinshaw J. . Encapsulating Streptomycin within a Small 40-mer RNA Chemistry & Biology
Molecular Dynamics Simulation mmb-A01WN, mmb-A01WU, mmb-A01XE, mmb-A0226, mmb-A022G
Equivalence Class NR_all_74199.3
BGSU version: 4.49

Compound SRY
Residue . / 26
Chain F / A
Non-redundant True
Interacting RNA chains A/A, B/B
RNA environment detailled ion
RNA environment global RNA
RNA family chains A/A: aptamer_rna, B/B: aptamer_rna
RNA family global aptamer_rna
Volume 317.62 Å3
Hydrophobicity 0.051
Hydrophilicity 1.511
Buriedness 0.728
Don/acc character 1.067
SiteScore 1.170
D Score 0.884
Kd