Complex 1nbk
System information
| Experimental technique | Solution NMR |
| Experimental resolution | N/A |
| System mass | 11.27 kDa |
| Deposition year | 2002 |
| Molecule type | RNA |
| # RNA entities | 1 |
| Organism | N/A |
| RCSB PDB Entry | 1nbk |
| Reference | Matsugami Akimasa, Kobayashi Shin-ichiro, Ouhashi Kiyoshi, Uesugi Seiichi, Yamamoto Rika, Taira Kazunari, Nishikawa Satoshi, Kumar Penmetcha K.R, Katahira Masato. . Structural Basis of the Highly Efficient Trapping of the HIV Tat Protein by an RNA Aptamer Structure |
| Equivalence Class |
NR_all_32674.1
BGSU version: 4.48 |
| Compound | GND |
| Residue | . / 35 |
| Chain | B / A |
| Non-redundant | True |
| Interacting RNA chains | A/A |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: aptamer_rna |
| RNA family global | aptamer_rna |
| Volume | 152.64 Å3 |
| Hydrophobicity | 0.170 |
| Hydrophilicity | 0.496 |
| Buriedness | 0.481 |
| Don/acc character | 1.924 |
| SiteScore | 1.110 |
| D Score | 1.067 |
| Kd | — |
| Compound | GND |
| Residue | . / 36 |
| Chain | C / A |
| Non-redundant | False |
| Interacting RNA chains | A/A |
| RNA environment detailled | other |
| RNA environment global | RNA/Other |
| RNA family chains | A/A: aptamer_rna |
| RNA family global | aptamer_rna |
| Volume | 225.01 Å3 |
| Hydrophobicity | 0.334 |
| Hydrophilicity | 0.928 |
| Buriedness | 0.680 |
| Don/acc character | 1.675 |
| SiteScore | 0.980 |
| D Score | 0.815 |
| Kd | — |