HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 1n8r

System information

Experimental technique X-ray
Experimental resolution 3.00
System mass 1458.64 kDa
Deposition year 2002
Molecule type RNA/Protein
# RNA entities 1
Organism Haloarcula
RCSB PDB Entry 1n8r
Reference Hansen Jeffrey L., Moore Peter B., Steitz Thomas A.. . Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit Journal of Molecular Biology
Equivalence Class NR_all_26150.5
BGSU version: 4.48

Compound VIR
Residue . / 9403
Chain EA / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled RNA-only
RNA environment global RNA
RNA family chains A/A: rRNA
RNA family global rRNA
Volume 527.88 Å3
Hydrophobicity 0.347
Hydrophilicity 1.200
Buriedness 0.797
Don/acc character 1.804
SiteScore 1.216
D Score 1.027
Kd