HARIBOSS

Harnessing RIBOnucleic acid – Small molecules Structures


Complex 1lc4

System information

Experimental technique X-ray
Experimental resolution 2.54
System mass 15.65
Deposition year 2002
Molecule type RNA
# RNA entities 1
Organism []
RCSB PDB Entry 1lc4
Reference Vicens Quentin, Westhof Eric. . Crystal Structure of a Complex between the Aminoglycoside Tobramycin and an Oligonucleotide Containing the Ribosomal Decoding A Site Chemistry & Biology

Pocket TOY_.:C/47:A

Compound TOY
Non-redundant True
Interacting RNA chains B/B, A/A
Volume 98.44
Hydrophobicity 0.428
Hydrophilicity 0.699
Buriedness 0.547
Don/acc character 0.915
SiteScore 0.684
D Score 0.680

Pocket TOY_.:D/48:B

Compound TOY
Non-redundant True
Interacting RNA chains B/B, A/A
Volume 87.46
Hydrophobicity 0.368
Hydrophilicity 0.822
Buriedness 0.556
Don/acc character 0.735
SiteScore 0.654
D Score 0.629