HARIBOSS

Harnessing RIBOnucleic acid - Small molecules Structures

Complex 1kc8

System information

Experimental technique X-ray
Experimental resolution 3.01
System mass 1459.04 kDa
Deposition year 2001
Molecule type RNA/Protein
# RNA entities 1
Organism Haloarcula
RCSB PDB Entry 1kc8
Reference Hansen Jeffrey L., Moore Peter B., Steitz Thomas A.. . Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit Journal of Molecular Biology
Equivalence Class NR_all_26150.5
BGSU version: 4.48

Compound BLS
Residue . / 9001
Chain EA / A
Non-redundant True
Interacting RNA chains A/A
RNA environment detailled ion, other
RNA environment global RNA/Other
RNA family chains A/A: rRNA
RNA family global rRNA
Volume 796.79 Å3
Hydrophobicity 0.237
Hydrophilicity 1.051
Buriedness 0.682
Don/acc character 1.679
SiteScore 1.139
D Score 1.006
Kd

Compound BLS
Residue . / 9002
Chain FA / A
Non-redundant False
Interacting RNA chains A/A
RNA environment detailled other
RNA environment global RNA/Other
RNA family chains A/A: rRNA
RNA family global rRNA
Volume 354.66 Å3
Hydrophobicity 0.415
Hydrophilicity 1.029
Buriedness 0.697
Don/acc character 1.182
SiteScore 0.986
D Score 0.811
Kd